Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.67■□□□□ 0.42
UBE3AQ05086 AL589739.1-201ENST00000607720 493 ntBASIC17.67■□□□□ 0.42
UBE3AQ05086 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE3AQ05086 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE3AQ05086 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE3AQ05086 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBE3AQ05086 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE3AQ05086 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE3AQ05086 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE3AQ05086 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBE3AQ05086 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE3AQ05086 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
UBE3AQ05086 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE3AQ05086 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
UBE3AQ05086 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE3AQ05086 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 AC104581.1-202ENST00000635932 2618 ntBASIC17.66■□□□□ 0.42
UBE3AQ05086 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBE3AQ05086 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE3AQ05086 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE3AQ05086 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.66■□□□□ 0.42
UBE3AQ05086 AC098859.1-201ENST00000502915 1238 ntBASIC17.66■□□□□ 0.42
UBE3AQ05086 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE3AQ05086 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.66■□□□□ 0.42
UBE3AQ05086 RN7SL828P-201ENST00000607615 303 ntBASIC17.66■□□□□ 0.42
UBE3AQ05086 AL844908.2-201ENST00000609461 460 ntBASIC17.66■□□□□ 0.42
UBE3AQ05086 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.66■□□□□ 0.42
UBE3AQ05086 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBE3AQ05086 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE3AQ05086 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE3AQ05086 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBE3AQ05086 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBE3AQ05086 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE3AQ05086 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBE3AQ05086 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 BTBD7P1-201ENST00000447253 1453 ntBASIC17.65■□□□□ 0.42
UBE3AQ05086 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 ZNF890P-202ENST00000530367 1156 ntBASIC17.65■□□□□ 0.42
UBE3AQ05086 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.65■□□□□ 0.42
UBE3AQ05086 AC140912.1-201ENST00000577171 1054 ntBASIC17.65■□□□□ 0.42
UBE3AQ05086 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 AC008738.7-201ENST00000609744 511 ntBASIC17.65■□□□□ 0.42
UBE3AQ05086 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UBE3AQ05086 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE3AQ05086 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
UBE3AQ05086 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE3AQ05086 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
UBE3AQ05086 AC007541.1-201ENST00000570282 1469 ntBASIC17.64■□□□□ 0.41
UBE3AQ05086 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
UBE3AQ05086 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
UBE3AQ05086 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
UBE3AQ05086 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBE3AQ05086 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.64■□□□□ 0.41
UBE3AQ05086 RPL37AP1-201ENST00000412502 279 ntBASIC17.64■□□□□ 0.41
UBE3AQ05086 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.64■□□□□ 0.41
UBE3AQ05086 MTND6P24-201ENST00000440466 518 ntBASIC17.64■□□□□ 0.41
UBE3AQ05086 ATP5G2P4-201ENST00000442175 420 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms