Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 CTBP2P3-201ENST00000585629 1255 ntBASIC20.54■□□□□ 0.88
SCN7AQ01118 AC025048.3-201ENST00000590609 569 ntBASIC20.54■□□□□ 0.88
SCN7AQ01118 AC005702.4-201ENST00000618393 416 ntBASIC20.54■□□□□ 0.88
SCN7AQ01118 AL033527.4-201ENST00000641026 673 ntBASIC20.54■□□□□ 0.88
SCN7AQ01118 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN7AQ01118 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SCN7AQ01118 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.54■□□□□ 0.88
SCN7AQ01118 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN7AQ01118 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SCN7AQ01118 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.54■□□□□ 0.88
SCN7AQ01118 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SCN7AQ01118 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SCN7AQ01118 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN7AQ01118 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN7AQ01118 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN7AQ01118 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN7AQ01118 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN7AQ01118 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.53■□□□□ 0.88
SCN7AQ01118 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.53■□□□□ 0.88
SCN7AQ01118 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCN7AQ01118 RPS2P32-201ENST00000439199 892 ntBASIC20.53■□□□□ 0.88
SCN7AQ01118 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SCN7AQ01118 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCN7AQ01118 RN7SL752P-201ENST00000463779 287 ntBASIC20.53■□□□□ 0.88
SCN7AQ01118 AC022494.1-201ENST00000466044 728 ntBASIC20.53■□□□□ 0.88
SCN7AQ01118 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.53■□□□□ 0.88
SCN7AQ01118 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.53■□□□□ 0.88
SCN7AQ01118 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.53■□□□□ 0.88
SCN7AQ01118 AC093726.1-201ENST00000608064 963 ntBASIC20.53■□□□□ 0.88
SCN7AQ01118 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.53■□□□□ 0.88
SCN7AQ01118 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.53■□□□□ 0.88
SCN7AQ01118 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN7AQ01118 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCN7AQ01118 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCN7AQ01118 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SCN7AQ01118 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 PP12613-201ENST00000424958 2230 ntBASIC20.52■□□□□ 0.88
SCN7AQ01118 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SCN7AQ01118 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SCN7AQ01118 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.52■□□□□ 0.88
SCN7AQ01118 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.52■□□□□ 0.88
SCN7AQ01118 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.52■□□□□ 0.88
SCN7AQ01118 WFDC1-204ENST00000613603 549 ntBASIC20.52■□□□□ 0.88
SCN7AQ01118 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN7AQ01118 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.52■□□□□ 0.88
SCN7AQ01118 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SCN7AQ01118 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SCN7AQ01118 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCN7AQ01118 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCN7AQ01118 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SCN7AQ01118 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN7AQ01118 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SCN7AQ01118 MIR658-201ENST00000385210 100 ntBASIC20.51■□□□□ 0.87
SCN7AQ01118 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN7AQ01118 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.51■□□□□ 0.87
SCN7AQ01118 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SCN7AQ01118 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.51■□□□□ 0.87
SCN7AQ01118 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN7AQ01118 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN7AQ01118 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCN7AQ01118 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.51■□□□□ 0.87
SCN7AQ01118 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.51■□□□□ 0.87
SCN7AQ01118 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN7AQ01118 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN7AQ01118 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.51■□□□□ 0.87
SCN7AQ01118 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN7AQ01118 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SCN7AQ01118 CYP4F24P-201ENST00000586049 1580 ntBASIC20.51■□□□□ 0.87
SCN7AQ01118 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms