Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
AP3S2P59780 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
AP3S2P59780 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 AL021920.2-201ENST00000624828 1351 ntBASIC14.45□□□□□ -0.1
AP3S2P59780 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S2P59780 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AP3S2P59780 AC010491.1-201ENST00000563101 2797 ntBASIC14.45□□□□□ -0.1
AP3S2P59780 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 AC010460.3-201ENST00000511359 1579 ntBASIC14.44□□□□□ -0.1
AP3S2P59780 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AP3S2P59780 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.44□□□□□ -0.1
AP3S2P59780 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 AP001412.1-201ENST00000608405 714 ntBASIC14.44□□□□□ -0.1
AP3S2P59780 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.44□□□□□ -0.1
AP3S2P59780 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
AP3S2P59780 AC006449.6-201ENST00000612330 2296 ntBASIC14.44□□□□□ -0.1
AP3S2P59780 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S2P59780 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S2P59780 GGT4P-201ENST00000623672 1708 ntBASIC14.44□□□□□ -0.1
AP3S2P59780 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 KRT18P48-201ENST00000434763 852 ntBASIC14.43□□□□□ -0.1
AP3S2P59780 ECEL1P2-202ENST00000465689 757 ntBASIC14.43□□□□□ -0.1
AP3S2P59780 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 AC034232.1-201ENST00000506026 1064 ntBASIC14.43□□□□□ -0.1
AP3S2P59780 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.43□□□□□ -0.1
AP3S2P59780 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP3S2P59780 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
AP3S2P59780 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP3S2P59780 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.43□□□□□ -0.1
AP3S2P59780 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms