Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH11P55287 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH11P55287 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH11P55287 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 AL135999.2-201ENST00000622438 1686 ntBASIC15.42■□□□□ 0.06
CDH11P55287 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH11P55287 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH11P55287 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH11P55287 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH11P55287 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.42■□□□□ 0.06
CDH11P55287 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH11P55287 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.42■□□□□ 0.06
CDH11P55287 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.42■□□□□ 0.06
CDH11P55287 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH11P55287 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH11P55287 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CDH11P55287 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH11P55287 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH11P55287 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CDH11P55287 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH11P55287 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 FAM197Y8-203ENST00000450145 560 ntBASIC15.41■□□□□ 0.06
CDH11P55287 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.41■□□□□ 0.06
CDH11P55287 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.41■□□□□ 0.06
CDH11P55287 AC011467.2-201ENST00000598425 242 ntBASIC15.41■□□□□ 0.06
CDH11P55287 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH11P55287 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDH11P55287 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.41■□□□□ 0.06
CDH11P55287 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH11P55287 AC022188.1-201ENST00000620960 1664 ntBASIC15.41■□□□□ 0.06
CDH11P55287 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH11P55287 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDH11P55287 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 AL391256.1-201ENST00000443260 1855 ntBASIC15.4■□□□□ 0.06
CDH11P55287 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms