Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
RAD23BP54727 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RAD23BP54727 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.93■□□□□ 0.46
RAD23BP54727 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD23BP54727 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
RAD23BP54727 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.93■□□□□ 0.46
RAD23BP54727 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.93■□□□□ 0.46
RAD23BP54727 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RAD23BP54727 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD23BP54727 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.93■□□□□ 0.46
RAD23BP54727 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RAD23BP54727 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 SNX33P1-201ENST00000592116 1762 ntBASIC17.92■□□□□ 0.46
RAD23BP54727 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 MIR940-201ENST00000401276 94 ntBASIC17.92■□□□□ 0.46
RAD23BP54727 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.92■□□□□ 0.46
RAD23BP54727 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAD23BP54727 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
RAD23BP54727 RNA5SP416-201ENST00000516838 111 ntBASIC17.92■□□□□ 0.46
RAD23BP54727 KRT18P58-201ENST00000527480 1120 ntBASIC17.92■□□□□ 0.46
RAD23BP54727 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.92■□□□□ 0.46
RAD23BP54727 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.92■□□□□ 0.46
RAD23BP54727 MIR4515-201ENST00000584082 81 ntBASIC17.92■□□□□ 0.46
RAD23BP54727 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAD23BP54727 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAD23BP54727 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RAD23BP54727 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.92■□□□□ 0.46
RAD23BP54727 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.92■□□□□ 0.46
RAD23BP54727 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAD23BP54727 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAD23BP54727 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 PCDH8P1-201ENST00000428983 2773 ntBASIC17.91■□□□□ 0.46
RAD23BP54727 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RAD23BP54727 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.91■□□□□ 0.46
RAD23BP54727 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RAD23BP54727 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.91■□□□□ 0.46
RAD23BP54727 POLD2P1-201ENST00000511220 997 ntBASIC17.91■□□□□ 0.46
RAD23BP54727 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.91■□□□□ 0.46
RAD23BP54727 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 AC087641.1-201ENST00000557561 1021 ntBASIC17.91■□□□□ 0.46
RAD23BP54727 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.91■□□□□ 0.46
RAD23BP54727 CYP2A7P1-201ENST00000595391 815 ntBASIC17.91■□□□□ 0.46
RAD23BP54727 AC004877.2-201ENST00000623941 599 ntBASIC17.91■□□□□ 0.46
RAD23BP54727 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.91■□□□□ 0.46
RAD23BP54727 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAD23BP54727 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAD23BP54727 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.91■□□□□ 0.46
RAD23BP54727 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms