Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 TSPY6P-201ENST00000448518 926 ntBASIC16.5■□□□□ 0.23
GTF2A1P52655 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 AL603832.2-201ENST00000566195 2125 ntBASIC16.5■□□□□ 0.23
GTF2A1P52655 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.5■□□□□ 0.23
GTF2A1P52655 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.5■□□□□ 0.23
GTF2A1P52655 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.5■□□□□ 0.23
GTF2A1P52655 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
GTF2A1P52655 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GTF2A1P52655 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 AC099521.3-201ENST00000624251 2938 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GTF2A1P52655 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 LINC00552-201ENST00000625151 2579 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 CICP23-201ENST00000605013 2741 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 KRT8P32-201ENST00000512863 1461 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 AC027612.1-201ENST00000445234 2395 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.49■□□□□ 0.23
GTF2A1P52655 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.49■□□□□ 0.23
GTF2A1P52655 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 AC016396.2-201ENST00000562575 1417 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 AC098934.4-201ENST00000564127 592 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
GTF2A1P52655 AL137784.2-201ENST00000607332 1000 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GTF2A1P52655 LINC01101-201ENST00000622953 1884 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
GTF2A1P52655 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 AC232323.1-201ENST00000540724 2099 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 REXO1L5P-201ENST00000622260 2098 ntBASIC16.49■□□□□ 0.23
GTF2A1P52655 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
GTF2A1P52655 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GTF2A1P52655 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
GTF2A1P52655 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.48■□□□□ 0.23
GTF2A1P52655 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.48■□□□□ 0.23
GTF2A1P52655 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.48■□□□□ 0.23
GTF2A1P52655 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GTF2A1P52655 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms