Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 OR2I1P-209ENST00000641730 5365 ntBASIC14.52□□□□□ -0.08
CBX5P45973 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.52□□□□□ -0.08
CBX5P45973 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.52□□□□□ -0.08
CBX5P45973 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.52□□□□□ -0.08
CBX5P45973 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CBX5P45973 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 AC092171.3-201ENST00000610122 2651 ntBASIC14.52□□□□□ -0.08
CBX5P45973 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CBX5P45973 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 FRMD8P1-201ENST00000440433 1524 ntBASIC14.52□□□□□ -0.08
CBX5P45973 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CBX5P45973 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CBX5P45973 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CBX5P45973 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.52□□□□□ -0.08
CBX5P45973 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.52□□□□□ -0.09
CBX5P45973 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.52□□□□□ -0.09
CBX5P45973 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.52□□□□□ -0.09
CBX5P45973 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.52□□□□□ -0.09
CBX5P45973 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.52□□□□□ -0.09
CBX5P45973 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.52□□□□□ -0.09
CBX5P45973 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.52□□□□□ -0.09
CBX5P45973 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CBX5P45973 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.52□□□□□ -0.09
CBX5P45973 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CBX5P45973 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.52□□□□□ -0.09
CBX5P45973 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 SBF1P1-201ENST00000444527 5631 ntBASIC14.52□□□□□ -0.09
CBX5P45973 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.52□□□□□ -0.09
CBX5P45973 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CBX5P45973 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CBX5P45973 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.52□□□□□ -0.09
CBX5P45973 AC138969.2-201ENST00000532739 9932 ntBASIC14.52□□□□□ -0.09
CBX5P45973 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.51□□□□□ -0.09
CBX5P45973 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.51□□□□□ -0.09
CBX5P45973 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 HLA-A-202ENST00000376806 1854 ntBASIC14.51□□□□□ -0.09
CBX5P45973 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 KRT18P22-201ENST00000402024 1347 ntBASIC14.51□□□□□ -0.09
CBX5P45973 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.51□□□□□ -0.09
CBX5P45973 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.51□□□□□ -0.09
CBX5P45973 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.51□□□□□ -0.09
CBX5P45973 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CBX5P45973 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.51□□□□□ -0.09
CBX5P45973 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.51□□□□□ -0.09
CBX5P45973 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.51□□□□□ -0.09
CBX5P45973 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 PRAL-201ENST00000624952 3286 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms