Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.55■□□□□ 0.4
SLC1A1P43005 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AC129492.6-201ENST00000611383 1305 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AC005052.1-201ENST00000625181 2492 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC1A1P43005 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 RPS15P9-201ENST00000494093 319 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AC107918.2-201ENST00000530817 355 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AC005412.3-201ENST00000580309 715 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 CYP2A7P1-201ENST00000595391 815 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC1A1P43005 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AP001350.2-201ENST00000625104 1094 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC1A1P43005 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC1A1P43005 SLC22A20-204ENST00000530038 1673 ntBASIC17.55■□□□□ 0.4
SLC1A1P43005 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
SLC1A1P43005 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A1P43005 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A1P43005 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SLC1A1P43005 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SLC1A1P43005 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 PCDHA1-201ENST00000378133 2726 ntBASIC17.54■□□□□ 0.4
SLC1A1P43005 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A1P43005 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 PMS2P1-201ENST00000431037 1228 ntBASIC17.54■□□□□ 0.4
SLC1A1P43005 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.54■□□□□ 0.4
SLC1A1P43005 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC1A1P43005 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC1A1P43005 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC1A1P43005 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A1P43005 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC1A1P43005 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC1A1P43005 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC1A1P43005 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.53■□□□□ 0.4
SLC1A1P43005 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
SLC1A1P43005 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC1A1P43005 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms