Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 AC023274.1-201ENST00000418278 595 ntBASIC17.72■□□□□ 0.43
CHKAP35790 PAWRP1-201ENST00000451083 565 ntBASIC17.72■□□□□ 0.43
CHKAP35790 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.72■□□□□ 0.43
CHKAP35790 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHKAP35790 AC096734.2-201ENST00000562054 433 ntBASIC17.72■□□□□ 0.43
CHKAP35790 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.72■□□□□ 0.43
CHKAP35790 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.72■□□□□ 0.43
CHKAP35790 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHKAP35790 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHKAP35790 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.71■□□□□ 0.43
CHKAP35790 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 OR7E47P-204ENST00000575924 449 ntBASIC17.71■□□□□ 0.43
CHKAP35790 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.71■□□□□ 0.43
CHKAP35790 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHKAP35790 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.71■□□□□ 0.43
CHKAP35790 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHKAP35790 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHKAP35790 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CHKAP35790 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHKAP35790 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHKAP35790 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHKAP35790 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.7■□□□□ 0.42
CHKAP35790 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHKAP35790 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHKAP35790 IGLL3P-201ENST00000412472 434 ntBASIC17.7■□□□□ 0.42
CHKAP35790 MCCD1P2-201ENST00000423228 335 ntBASIC17.7■□□□□ 0.42
CHKAP35790 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.7■□□□□ 0.42
CHKAP35790 AC124947.2-201ENST00000547118 1133 ntBASIC17.7■□□□□ 0.42
CHKAP35790 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.7■□□□□ 0.42
CHKAP35790 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.7■□□□□ 0.42
CHKAP35790 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHKAP35790 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.7■□□□□ 0.42
CHKAP35790 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHKAP35790 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.7■□□□□ 0.42
CHKAP35790 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.7■□□□□ 0.42
CHKAP35790 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
CHKAP35790 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.69■□□□□ 0.42
CHKAP35790 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.69■□□□□ 0.42
CHKAP35790 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHKAP35790 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHKAP35790 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHKAP35790 RPSAP43-201ENST00000402237 625 ntBASIC17.69■□□□□ 0.42
CHKAP35790 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.69■□□□□ 0.42
CHKAP35790 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 GPX1P2-201ENST00000429271 606 ntBASIC17.69■□□□□ 0.42
CHKAP35790 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.69■□□□□ 0.42
CHKAP35790 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms