Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CHRNA3P32297 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA3P32297 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA3P32297 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA3P32297 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA3P32297 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA3P32297 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.72■□□□□ 0.43
CHRNA3P32297 AC116407.3-201ENST00000623905 1129 ntBASIC17.72■□□□□ 0.43
CHRNA3P32297 AC107918.4-202ENST00000641623 219 ntBASIC17.72■□□□□ 0.43
CHRNA3P32297 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA3P32297 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRNA3P32297 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHRNA3P32297 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHRNA3P32297 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA3P32297 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.72■□□□□ 0.43
CHRNA3P32297 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHRNA3P32297 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRNA3P32297 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CHRNA3P32297 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
CHRNA3P32297 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA3P32297 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 AC092364.2-201ENST00000596710 2692 ntBASIC17.71■□□□□ 0.43
CHRNA3P32297 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHRNA3P32297 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA3P32297 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRNA3P32297 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.71■□□□□ 0.43
CHRNA3P32297 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.71■□□□□ 0.43
CHRNA3P32297 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.71■□□□□ 0.43
CHRNA3P32297 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CHRNA3P32297 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRNA3P32297 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
CHRNA3P32297 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNA3P32297 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA3P32297 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNA3P32297 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA3P32297 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNA3P32297 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNA3P32297 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNA3P32297 AC012640.2-201ENST00000561606 901 ntBASIC17.7■□□□□ 0.42
CHRNA3P32297 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA3P32297 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.7■□□□□ 0.42
CHRNA3P32297 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNA3P32297 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRNA3P32297 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNA3P32297 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNA3P32297 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA3P32297 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHRNA3P32297 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms