Protein–RNA interactions for Protein: P28340

POLD1, DNA polymerase delta catalytic subunit, humanhuman

Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLD1P28340 AC005229.1-201ENST00000392885 409 ntBASIC20.67■□□□□ 0.9
POLD1P28340 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.67■□□□□ 0.9
POLD1P28340 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLD1P28340 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
POLD1P28340 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.67■□□□□ 0.9
POLD1P28340 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLD1P28340 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.66■□□□□ 0.9
POLD1P28340 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
POLD1P28340 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.66■□□□□ 0.9
POLD1P28340 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.66■□□□□ 0.9
POLD1P28340 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.66■□□□□ 0.9
POLD1P28340 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.66■□□□□ 0.9
POLD1P28340 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.66■□□□□ 0.9
POLD1P28340 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.66■□□□□ 0.9
POLD1P28340 MIR6727-201ENST00000620702 65 ntBASIC20.66■□□□□ 0.9
POLD1P28340 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLD1P28340 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.66■□□□□ 0.9
POLD1P28340 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLD1P28340 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLD1P28340 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLD1P28340 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.66■□□□□ 0.9
POLD1P28340 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.65■□□□□ 0.9
POLD1P28340 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.65■□□□□ 0.9
POLD1P28340 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.65■□□□□ 0.9
POLD1P28340 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.65■□□□□ 0.9
POLD1P28340 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.65■□□□□ 0.9
POLD1P28340 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
POLD1P28340 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
POLD1P28340 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
POLD1P28340 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.65■□□□□ 0.9
POLD1P28340 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC20.65■□□□□ 0.9
POLD1P28340 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.65■□□□□ 0.9
POLD1P28340 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.65■□□□□ 0.9
POLD1P28340 AC026979.3-201ENST00000607315 403 ntBASIC20.65■□□□□ 0.9
POLD1P28340 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.65■□□□□ 0.9
POLD1P28340 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLD1P28340 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLD1P28340 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.64■□□□□ 0.9
POLD1P28340 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLD1P28340 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.64■□□□□ 0.9
POLD1P28340 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.64■□□□□ 0.9
POLD1P28340 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.64■□□□□ 0.9
POLD1P28340 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLD1P28340 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
POLD1P28340 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 KRT8P49-201ENST00000604166 1432 ntBASIC20.64■□□□□ 0.89
POLD1P28340 AL021920.2-201ENST00000624828 1351 ntBASIC20.64■□□□□ 0.89
POLD1P28340 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 AC007551.1-201ENST00000457394 519 ntBASIC20.64■□□□□ 0.89
POLD1P28340 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.64■□□□□ 0.89
POLD1P28340 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.64■□□□□ 0.89
POLD1P28340 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 TIMM17BP1-201ENST00000545713 516 ntBASIC20.64■□□□□ 0.89
POLD1P28340 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLD1P28340 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.64■□□□□ 0.89
POLD1P28340 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.64■□□□□ 0.89
POLD1P28340 AC092337.1-201ENST00000568699 1129 ntBASIC20.64■□□□□ 0.89
POLD1P28340 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.64■□□□□ 0.89
POLD1P28340 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.64■□□□□ 0.89
POLD1P28340 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.64■□□□□ 0.89
POLD1P28340 AC106872.11-201ENST00000605838 421 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms