Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 MYCLP1-201ENST00000372451 1075 ntBASIC14.1□□□□□ -0.15
CXCL3P19876 SEC1P-202ENST00000473944 940 ntBASIC14.1□□□□□ -0.15
CXCL3P19876 AP003041.3-201ENST00000527151 707 ntBASIC14.1□□□□□ -0.15
CXCL3P19876 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 AC073195.1-201ENST00000607241 877 ntBASIC14.1□□□□□ -0.15
CXCL3P19876 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 AC016027.1-202ENST00000607927 1699 ntBASIC14.1□□□□□ -0.15
CXCL3P19876 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.1□□□□□ -0.15
CXCL3P19876 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CXCL3P19876 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCL3P19876 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 AC005840.4-201ENST00000541242 2494 ntBASIC14.09□□□□□ -0.15
CXCL3P19876 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CXCL3P19876 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 PKD1P5-201ENST00000532415 10291 ntBASIC14.09□□□□□ -0.15
CXCL3P19876 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL3P19876 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCL3P19876 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL3P19876 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.09□□□□□ -0.15
CXCL3P19876 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 MIR4651-201ENST00000582622 73 ntBASIC14.09□□□□□ -0.15
CXCL3P19876 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.09□□□□□ -0.15
CXCL3P19876 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CXCL3P19876 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CXCL3P19876 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CXCL3P19876 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCL3P19876 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CXCL3P19876 AC002310.6-201ENST00000624451 1377 ntBASIC14.09□□□□□ -0.15
CXCL3P19876 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCL3P19876 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL3P19876 CICP23-201ENST00000605013 2741 ntBASIC14.08□□□□□ -0.15
CXCL3P19876 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCL3P19876 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCL3P19876 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCL3P19876 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms