Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.11□□□□□ -0.31
CD28P10747 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.11□□□□□ -0.31
CD28P10747 UXT-AS1-201ENST00000590504 1525 ntBASIC13.11□□□□□ -0.31
CD28P10747 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CD28P10747 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.11□□□□□ -0.31
CD28P10747 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.11□□□□□ -0.31
CD28P10747 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 HCG4-201ENST00000418983 998 ntBASIC13.1□□□□□ -0.31
CD28P10747 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CD28P10747 DUX4L27-201ENST00000554796 1261 ntBASIC13.1□□□□□ -0.31
CD28P10747 AC005498.2-205ENST00000593218 784 ntBASIC13.1□□□□□ -0.31
CD28P10747 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CD28P10747 AC016396.2-201ENST00000562575 1417 ntBASIC13.1□□□□□ -0.31
CD28P10747 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD28P10747 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD28P10747 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.1□□□□□ -0.31
CD28P10747 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 AC134043.2-201ENST00000624206 2238 ntBASIC13.09□□□□□ -0.31
CD28P10747 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 TOP3BP1-201ENST00000420768 1380 ntBASIC13.09□□□□□ -0.31
CD28P10747 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 SLC22A20-204ENST00000530038 1673 ntBASIC13.09□□□□□ -0.31
CD28P10747 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.09□□□□□ -0.31
CD28P10747 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.09□□□□□ -0.31
CD28P10747 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 RBPMS2P1-201ENST00000437762 623 ntBASIC13.09□□□□□ -0.31
CD28P10747 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms