Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM3P0C091 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM3P0C091 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.2■□□□□ 0.02
FREM3P0C091 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM3P0C091 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.2■□□□□ 0.02
FREM3P0C091 AL662844.4-201ENST00000606367 2838 ntBASIC15.2■□□□□ 0.02
FREM3P0C091 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.2■□□□□ 0.02
FREM3P0C091 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FREM3P0C091 AL645728.1-201ENST00000366221 2101 ntBASIC15.2■□□□□ 0.02
FREM3P0C091 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM3P0C091 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM3P0C091 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM3P0C091 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 PMS2P4-201ENST00000412466 1052 ntBASIC15.19■□□□□ 0.02
FREM3P0C091 AC109322.1-201ENST00000524499 1264 ntBASIC15.19■□□□□ 0.02
FREM3P0C091 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.19■□□□□ 0.02
FREM3P0C091 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 AC005412.3-201ENST00000580309 715 ntBASIC15.19■□□□□ 0.02
FREM3P0C091 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 HCG4-201ENST00000418983 998 ntBASIC15.19■□□□□ 0.02
FREM3P0C091 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 AC112191.1-201ENST00000523689 701 ntBASIC15.19■□□□□ 0.02
FREM3P0C091 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 MIR4469-201ENST00000583919 79 ntBASIC15.19■□□□□ 0.02
FREM3P0C091 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FREM3P0C091 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.19■□□□□ 0.02
FREM3P0C091 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
FREM3P0C091 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FREM3P0C091 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM3P0C091 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
FREM3P0C091 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.18■□□□□ 0.02
FREM3P0C091 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.18■□□□□ 0.02
FREM3P0C091 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.18■□□□□ 0.02
FREM3P0C091 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
FREM3P0C091 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FREM3P0C091 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.18■□□□□ 0.02
FREM3P0C091 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
FREM3P0C091 AC078925.2-201ENST00000624013 1973 ntBASIC15.18■□□□□ 0.02
FREM3P0C091 PCDHA14-201ENST00000506751 2298 ntBASIC15.18■□□□□ 0.02
FREM3P0C091 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FREM3P0C091 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 AL139400.1-201ENST00000366220 510 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms