Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.1■□□□□ 0.49
CHRNA1P02708 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHRNA1P02708 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
CHRNA1P02708 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHRNA1P02708 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHRNA1P02708 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.09■□□□□ 0.49
CHRNA1P02708 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA1P02708 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA1P02708 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CHRNA1P02708 MTND6P24-201ENST00000440466 518 ntBASIC18.09■□□□□ 0.49
CHRNA1P02708 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.09■□□□□ 0.49
CHRNA1P02708 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 AL133215.2-201ENST00000609242 977 ntBASIC18.09■□□□□ 0.49
CHRNA1P02708 AL844908.2-201ENST00000609461 460 ntBASIC18.09■□□□□ 0.49
CHRNA1P02708 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA1P02708 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHRNA1P02708 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHRNA1P02708 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
CHRNA1P02708 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.09■□□□□ 0.49
CHRNA1P02708 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.09■□□□□ 0.49
CHRNA1P02708 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA1P02708 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA1P02708 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA1P02708 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CHRNA1P02708 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA1P02708 AC141586.5-201ENST00000624546 2050 ntBASIC18.08■□□□□ 0.49
CHRNA1P02708 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA1P02708 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.08■□□□□ 0.49
CHRNA1P02708 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHRNA1P02708 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHRNA1P02708 AC087499.5-201ENST00000452760 1342 ntBASIC18.08■□□□□ 0.49
CHRNA1P02708 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.08■□□□□ 0.48
CHRNA1P02708 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CHRNA1P02708 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.08■□□□□ 0.48
CHRNA1P02708 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.08■□□□□ 0.48
CHRNA1P02708 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 AC105021.1-202ENST00000570572 669 ntBASIC18.08■□□□□ 0.48
CHRNA1P02708 AL589739.1-201ENST00000607720 493 ntBASIC18.08■□□□□ 0.48
CHRNA1P02708 AC008738.7-201ENST00000609744 511 ntBASIC18.08■□□□□ 0.48
CHRNA1P02708 AC025048.6-201ENST00000634326 1161 ntBASIC18.08■□□□□ 0.48
CHRNA1P02708 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.08■□□□□ 0.48
CHRNA1P02708 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CHRNA1P02708 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.08■□□□□ 0.48
CHRNA1P02708 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
CHRNA1P02708 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHRNA1P02708 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHRNA1P02708 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA1P02708 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA1P02708 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA1P02708 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHRNA1P02708 CETN4P-206ENST00000642099 2168 ntBASIC18.07■□□□□ 0.48
CHRNA1P02708 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHRNA1P02708 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms