Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
MT-CO1P00395 MIR4515-201ENST00000584082 81 ntBASIC17.19■□□□□ 0.34
MT-CO1P00395 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MT-CO1P00395 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MT-CO1P00395 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
MT-CO1P00395 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 HMGA1P7-201ENST00000406908 502 ntBASIC17.18■□□□□ 0.34
MT-CO1P00395 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.18■□□□□ 0.34
MT-CO1P00395 AP002472.1-201ENST00000577490 586 ntBASIC17.18■□□□□ 0.34
MT-CO1P00395 AC005412.3-201ENST00000580309 715 ntBASIC17.18■□□□□ 0.34
MT-CO1P00395 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 KRT8P49-201ENST00000604166 1432 ntBASIC17.18■□□□□ 0.34
MT-CO1P00395 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-CO1P00395 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MT-CO1P00395 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-CO1P00395 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-CO1P00395 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MT-CO1P00395 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 FAM58CP-201ENST00000435741 640 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-CO1P00395 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MT-CO1P00395 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
MT-CO1P00395 AL031432.2-201ENST00000566714 459 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 AL928711.1-201ENST00000570165 459 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 MIR4469-201ENST00000583919 79 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.17■□□□□ 0.34
MT-CO1P00395 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-CO1P00395 AC068137.2-201ENST00000605408 478 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 AL691403.2-201ENST00000618460 490 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 AC091812.2-201ENST00000619081 385 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 AC134684.3-201ENST00000641758 218 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 AL645728.2-201ENST00000641974 660 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-CO1P00395 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MT-CO1P00395 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-CO1P00395 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 AL353732.1-201ENST00000569618 1459 ntBASIC17.17■□□□□ 0.34
MT-CO1P00395 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MT-CO1P00395 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MT-CO1P00395 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MT-CO1P00395 AL021920.2-201ENST00000624828 1351 ntBASIC17.16■□□□□ 0.34
MT-CO1P00395 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-CO1P00395 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms