Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
UBL3O95164 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
UBL3O95164 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.1■□□□□ 0.01
UBL3O95164 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.1■□□□□ 0.01
UBL3O95164 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 RNPS1P1-201ENST00000507437 918 ntBASIC15.1■□□□□ 0.01
UBL3O95164 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.1■□□□□ 0.01
UBL3O95164 OR7E14P-202ENST00000530490 1290 ntBASIC15.1■□□□□ 0.01
UBL3O95164 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.1■□□□□ 0.01
UBL3O95164 AC006557.2-201ENST00000592985 1240 ntBASIC15.1■□□□□ 0.01
UBL3O95164 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBL3O95164 AC025062.2-201ENST00000605477 670 ntBASIC15.1■□□□□ 0.01
UBL3O95164 TP73-AS1-207ENST00000624167 988 ntBASIC15.1■□□□□ 0.01
UBL3O95164 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
UBL3O95164 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.1■□□□□ 0.01
UBL3O95164 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
UBL3O95164 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.1■□□□□ 0.01
UBL3O95164 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBL3O95164 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.09■□□□□ 0.01
UBL3O95164 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
UBL3O95164 AC093525.9-201ENST00000624961 1746 ntBASIC15.09■□□□□ 0.01
UBL3O95164 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL3O95164 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.09■□□□□ 0.01
UBL3O95164 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.09■□□□□ 0.01
UBL3O95164 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL3O95164 AP002469.2-201ENST00000531724 424 ntBASIC15.09■□□□□ 0.01
UBL3O95164 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL3O95164 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.09■□□□□ 0.01
UBL3O95164 AC107918.4-202ENST00000641623 219 ntBASIC15.09■□□□□ 0.01
UBL3O95164 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
UBL3O95164 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 AC092053.1-201ENST00000605787 1936 ntBASIC15.09■□□□□ 0.01
UBL3O95164 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
UBL3O95164 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBL3O95164 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.09■□□□□ 0.01
UBL3O95164 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 AC132872.4-202ENST00000622924 2756 ntBASIC15.08■□□□□ 0.01
UBL3O95164 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.08■□□□□ 0.01
UBL3O95164 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.08■□□□□ 0.01
UBL3O95164 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0.01
UBL3O95164 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
UBL3O95164 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
UBL3O95164 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
UBL3O95164 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.08■□□□□ 0
UBL3O95164 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.08■□□□□ 0
UBL3O95164 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
UBL3O95164 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.08■□□□□ 0
UBL3O95164 AL662844.1-201ENST00000546340 181 ntBASIC15.08■□□□□ 0
UBL3O95164 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.08■□□□□ 0
UBL3O95164 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.08■□□□□ 0
UBL3O95164 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.08■□□□□ 0
UBL3O95164 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.08■□□□□ 0
UBL3O95164 AL139424.1-201ENST00000607572 797 ntBASIC15.08■□□□□ 0
UBL3O95164 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms