Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 AK4P3-201ENST00000418260 669 ntBASIC15.29■□□□□ 0.04
CLPXO76031 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.29■□□□□ 0.04
CLPXO76031 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.29■□□□□ 0.04
CLPXO76031 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CLPXO76031 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
CLPXO76031 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLPXO76031 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLPXO76031 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
CLPXO76031 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLPXO76031 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLPXO76031 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CLPXO76031 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 AP005117.1-202ENST00000581724 1908 ntBASIC15.28■□□□□ 0.04
CLPXO76031 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 MIR3180-4-201ENST00000582223 153 ntBASIC15.28■□□□□ 0.04
CLPXO76031 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.28■□□□□ 0.04
CLPXO76031 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLPXO76031 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLPXO76031 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.28■□□□□ 0.04
CLPXO76031 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.28■□□□□ 0.04
CLPXO76031 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPXO76031 AC023908.3-201ENST00000564211 3047 ntBASIC15.27■□□□□ 0.04
CLPXO76031 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPXO76031 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CLPXO76031 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLPXO76031 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.27■□□□□ 0.04
CLPXO76031 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms