Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AL031731.1-201ENST00000642131 2094 ntBASIC20.68■□□□□ 0.9
SMARCA5O60264 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMARCA5O60264 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMARCA5O60264 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.68■□□□□ 0.9
SMARCA5O60264 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SMARCA5O60264 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.67■□□□□ 0.9
SMARCA5O60264 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCA5O60264 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCA5O60264 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SMARCA5O60264 AC140113.2-201ENST00000604370 208 ntBASIC20.67■□□□□ 0.9
SMARCA5O60264 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.67■□□□□ 0.9
SMARCA5O60264 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SMARCA5O60264 AC012569.1-201ENST00000591191 1524 ntBASIC20.67■□□□□ 0.9
SMARCA5O60264 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.67■□□□□ 0.9
SMARCA5O60264 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.67■□□□□ 0.9
SMARCA5O60264 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SMARCA5O60264 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
SMARCA5O60264 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 GGT4P-201ENST00000623672 1708 ntBASIC20.67■□□□□ 0.9
SMARCA5O60264 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMARCA5O60264 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SMARCA5O60264 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCA5O60264 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCA5O60264 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMARCA5O60264 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMARCA5O60264 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMARCA5O60264 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SMARCA5O60264 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SMARCA5O60264 RHOQP3-201ENST00000437982 621 ntBASIC20.66■□□□□ 0.9
SMARCA5O60264 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCA5O60264 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.66■□□□□ 0.9
SMARCA5O60264 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.66■□□□□ 0.9
SMARCA5O60264 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SMARCA5O60264 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMARCA5O60264 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.65■□□□□ 0.9
SMARCA5O60264 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SMARCA5O60264 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 MIR940-201ENST00000401276 94 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.65■□□□□ 0.9
SMARCA5O60264 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.65■□□□□ 0.9
SMARCA5O60264 AC096734.2-201ENST00000562054 433 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 MIR4515-201ENST00000584082 81 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.65■□□□□ 0.9
SMARCA5O60264 AL513190.1-201ENST00000621254 727 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 AC004877.2-201ENST00000623941 599 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 AL139011.1-202ENST00000642063 584 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 AC092865.6-201ENST00000642101 219 ntBASIC20.65■□□□□ 0.9
SMARCA5O60264 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.65■□□□□ 0.9
SMARCA5O60264 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMARCA5O60264 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
SMARCA5O60264 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SMARCA5O60264 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.64■□□□□ 0.9
SMARCA5O60264 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMARCA5O60264 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.64■□□□□ 0.9
SMARCA5O60264 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMARCA5O60264 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMARCA5O60264 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SMARCA5O60264 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.64■□□□□ 0.89
SMARCA5O60264 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.64■□□□□ 0.89
SMARCA5O60264 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms