Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 PCDHA12-202ENST00000613593 2588 ntBASIC17.38■□□□□ 0.37
MSI1O43347 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 AL139384.1-201ENST00000612143 3047 ntBASIC17.38■□□□□ 0.37
MSI1O43347 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
MSI1O43347 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
MSI1O43347 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 DNAJB3-202ENST00000449667 1266 ntBASIC17.38■□□□□ 0.37
MSI1O43347 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 AC109635.5-201ENST00000533593 962 ntBASIC17.38■□□□□ 0.37
MSI1O43347 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MSI1O43347 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.38■□□□□ 0.37
MSI1O43347 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
MSI1O43347 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
MSI1O43347 UBALD1-205ENST00000590891 2641 ntBASIC17.38■□□□□ 0.37
MSI1O43347 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MSI1O43347 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.38■□□□□ 0.37
MSI1O43347 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.38■□□□□ 0.37
MSI1O43347 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MSI1O43347 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.37■□□□□ 0.37
MSI1O43347 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MSI1O43347 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MSI1O43347 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.37■□□□□ 0.37
MSI1O43347 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.37■□□□□ 0.37
MSI1O43347 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 ACTG1P14-201ENST00000446382 1122 ntBASIC17.37■□□□□ 0.37
MSI1O43347 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.37■□□□□ 0.37
MSI1O43347 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.37■□□□□ 0.37
MSI1O43347 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
MSI1O43347 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.37■□□□□ 0.37
MSI1O43347 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.37■□□□□ 0.37
MSI1O43347 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.37■□□□□ 0.37
MSI1O43347 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.37■□□□□ 0.37
MSI1O43347 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MSI1O43347 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.37■□□□□ 0.37
MSI1O43347 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MSI1O43347 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
MSI1O43347 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MSI1O43347 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MSI1O43347 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.36■□□□□ 0.37
MSI1O43347 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MSI1O43347 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.36■□□□□ 0.37
MSI1O43347 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms