Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
NDUFA1O15239 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 AC005521.1-201ENST00000393351 872 ntBASIC11.53□□□□□ -0.56
NDUFA1O15239 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.53□□□□□ -0.56
NDUFA1O15239 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.53□□□□□ -0.56
NDUFA1O15239 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 AC097493.4-201ENST00000641197 219 ntBASIC11.53□□□□□ -0.56
NDUFA1O15239 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.53□□□□□ -0.56
NDUFA1O15239 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.53□□□□□ -0.56
NDUFA1O15239 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.53□□□□□ -0.56
NDUFA1O15239 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.53□□□□□ -0.56
NDUFA1O15239 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
NDUFA1O15239 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.53□□□□□ -0.56
NDUFA1O15239 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.52□□□□□ -0.56
NDUFA1O15239 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.52□□□□□ -0.56
NDUFA1O15239 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
NDUFA1O15239 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.52□□□□□ -0.56
NDUFA1O15239 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.52□□□□□ -0.56
NDUFA1O15239 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
NDUFA1O15239 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NDUFA1O15239 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.52□□□□□ -0.57
NDUFA1O15239 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.52□□□□□ -0.57
NDUFA1O15239 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
NDUFA1O15239 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.52□□□□□ -0.57
NDUFA1O15239 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
NDUFA1O15239 VENTXP5-201ENST00000523979 775 ntBASIC11.52□□□□□ -0.57
NDUFA1O15239 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.52□□□□□ -0.57
NDUFA1O15239 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.52□□□□□ -0.57
NDUFA1O15239 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
NDUFA1O15239 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NDUFA1O15239 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.52□□□□□ -0.57
NDUFA1O15239 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NDUFA1O15239 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 AL645728.1-201ENST00000366221 2101 ntBASIC11.51□□□□□ -0.57
NDUFA1O15239 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NDUFA1O15239 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NDUFA1O15239 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NDUFA1O15239 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms