Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 DERL2-202ENST00000570848 657 ntTSL 5 BASIC22.85■■□□□ 1.25
CHD2O14647 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CHD2O14647 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CHD2O14647 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD2O14647 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC22.85■■□□□ 1.25
CHD2O14647 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC22.85■■□□□ 1.25
CHD2O14647 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC22.85■■□□□ 1.25
CHD2O14647 AC243960.2-201ENST00000600996 747 ntBASIC22.85■■□□□ 1.25
CHD2O14647 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD2O14647 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.84■■□□□ 1.25
CHD2O14647 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 HNRNPA1P48-201ENST00000562726 1377 ntBASIC22.84■■□□□ 1.25
CHD2O14647 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC22.84■■□□□ 1.25
CHD2O14647 AC104581.1-202ENST00000635932 2618 ntBASIC22.84■■□□□ 1.25
CHD2O14647 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC22.84■■□□□ 1.25
CHD2O14647 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CHD2O14647 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CHD2O14647 FTH1P14-201ENST00000482930 551 ntBASIC22.84■■□□□ 1.25
CHD2O14647 C2orf69P2-201ENST00000562032 1123 ntBASIC22.84■■□□□ 1.25
CHD2O14647 ARL16-210ENST00000574938 751 ntTSL 2 BASIC22.84■■□□□ 1.25
CHD2O14647 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC22.84■■□□□ 1.25
CHD2O14647 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC22.84■■□□□ 1.25
CHD2O14647 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC22.84■■□□□ 1.25
CHD2O14647 TP73-213ENST00000604479 1623 ntTSL 5 BASIC22.84■■□□□ 1.25
CHD2O14647 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHD2O14647 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.83■■□□□ 1.25
CHD2O14647 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHD2O14647 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHD2O14647 EEF1DP4-201ENST00000446006 880 ntBASIC22.83■■□□□ 1.25
CHD2O14647 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
CHD2O14647 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC22.83■■□□□ 1.25
CHD2O14647 AC068587.3-201ENST00000526613 355 ntBASIC22.83■■□□□ 1.25
CHD2O14647 SLC25A47P1-201ENST00000531577 414 ntBASIC22.83■■□□□ 1.25
CHD2O14647 RIT1-205ENST00000539040 919 ntTSL 2 BASIC22.83■■□□□ 1.25
CHD2O14647 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CHD2O14647 GNRHR2-203ENST00000581100 1187 ntBASIC22.83■■□□□ 1.25
CHD2O14647 AL022328.1-201ENST00000610050 478 ntBASIC22.83■■□□□ 1.25
CHD2O14647 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC22.83■■□□□ 1.25
CHD2O14647 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHD2O14647 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
CHD2O14647 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC22.83■■□□□ 1.25
CHD2O14647 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHD2O14647 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
CHD2O14647 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CHD2O14647 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CHD2O14647 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CHD2O14647 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
CHD2O14647 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CHD2O14647 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CHD2O14647 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CHD2O14647 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC22.82■■□□□ 1.24
CHD2O14647 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC22.82■■□□□ 1.24
CHD2O14647 AC104596.2-201ENST00000512793 793 ntBASIC22.82■■□□□ 1.24
CHD2O14647 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC22.82■■□□□ 1.24
CHD2O14647 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC22.82■■□□□ 1.24
CHD2O14647 AC124283.3-201ENST00000570869 594 ntBASIC22.82■■□□□ 1.24
CHD2O14647 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC22.82■■□□□ 1.24
CHD2O14647 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD2O14647 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.82■■□□□ 1.24
CHD2O14647 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC22.82■■□□□ 1.24
CHD2O14647 CYP4F24P-201ENST00000586049 1580 ntBASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms