Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 HMGA1P7-201ENST00000406908 502 ntBASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 MED15P5-201ENST00000423150 992 ntBASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL671710.1-201ENST00000610245 2349 ntBASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC196A0A1B0GTZ2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 KRT18P3-201ENST00000451602 1288 ntBASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 MIR3909-201ENST00000579518 119 ntBASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC196A0A1B0GTZ2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 PMS2P4-201ENST00000412466 1052 ntBASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 KRT18P2-201ENST00000447938 1258 ntBASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC140113.2-201ENST00000604370 208 ntBASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 AC004877.2-201ENST00000623941 599 ntBASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 AL512652.2-201ENST00000625156 1716 ntBASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC196A0A1B0GTZ2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms