Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 AC011498.5-201ENST00000592027 486 ntBASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 MTHFR-217ENST00000641820 1569 ntBASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 DBET-201ENST00000630918 3363 ntBASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV5A0A0B4J249 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV5A0A0B4J249 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.08□□□□□ -0.31
TRAV5A0A0B4J249 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TRAV5A0A0B4J249 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.08□□□□□ -0.31
TRAV5A0A0B4J249 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV5A0A0B4J249 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 NUS1P1-201ENST00000446295 882 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC104076.2-201ENST00000448912 469 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AL671277.2-201ENST00000458060 996 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC011467.2-201ENST00000598425 242 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC097493.4-201ENST00000641197 219 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC148477.5-201ENST00000625164 1645 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 LINC00895-201ENST00000629028 1637 ntBASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms