Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH1Q9Y2L9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 AC012306.2-201ENST00000609350 630 ntBASIC16.02■□□□□ 0.16
LRCH1Q9Y2L9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 CICP24-201ENST00000605464 2705 ntBASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 AC006486.2-201ENST00000624246 2199 ntBASIC16.02■□□□□ 0.15
LRCH1Q9Y2L9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 AL390955.1-201ENST00000428694 934 ntBASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 SLC25A1P4-201ENST00000567977 778 ntBASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 AC008687.5-201ENST00000593746 558 ntBASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 AC145285.6-201ENST00000604632 637 ntBASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH1Q9Y2L9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 AC096733.2-201ENST00000609937 1394 ntBASIC16■□□□□ 0.15
LRCH1Q9Y2L9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16■□□□□ 0.15
LRCH1Q9Y2L9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms