Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 HLA-J-203ENST00000494367 1087 ntBASIC16.49■□□□□ 0.23
SATB2Q9UPW6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 AC022145.2-201ENST00000598203 171 ntBASIC16.49■□□□□ 0.23
SATB2Q9UPW6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
SATB2Q9UPW6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 AC092474.2-201ENST00000424288 719 ntBASIC16.48■□□□□ 0.23
SATB2Q9UPW6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 AC023141.5-201ENST00000458585 616 ntBASIC16.48■□□□□ 0.23
SATB2Q9UPW6 AC109322.1-201ENST00000524499 1264 ntBASIC16.48■□□□□ 0.23
SATB2Q9UPW6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 AC092919.2-201ENST00000623631 1645 ntBASIC16.48■□□□□ 0.23
SATB2Q9UPW6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.48■□□□□ 0.23
SATB2Q9UPW6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 REXO1L11P-201ENST00000620964 1927 ntBASIC16.47■□□□□ 0.23
SATB2Q9UPW6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 MYCLP1-201ENST00000372451 1075 ntBASIC16.47■□□□□ 0.23
SATB2Q9UPW6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 AL513480.1-201ENST00000451731 511 ntBASIC16.47■□□□□ 0.23
SATB2Q9UPW6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 AC002558.1-201ENST00000488906 803 ntBASIC16.47■□□□□ 0.23
SATB2Q9UPW6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 AC239800.4-201ENST00000603712 296 ntBASIC16.47■□□□□ 0.23
SATB2Q9UPW6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 LINC00628-201ENST00000628516 1289 ntBASIC16.47■□□□□ 0.23
SATB2Q9UPW6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SATB2Q9UPW6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SATB2Q9UPW6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms