Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 AL513477.1-201ENST00000602865 2407 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 AL162727.3-201ENST00000635661 2787 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 CICP6-201ENST00000457191 2729 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 AC211486.1-202ENST00000416371 468 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 AC211476.1-201ENST00000503899 468 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 IGHV3-65-201ENST00000523210 341 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 AC134684.3-201ENST00000641758 218 ntBASIC17.02■□□□□ 0.32
NCKIPSDQ9NZQ3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCKIPSDQ9NZQ3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ELK2BP-201ENST00000415014 1224 ntBASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 AC023274.1-201ENST00000418278 595 ntBASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 VN2R19P-201ENST00000442399 1052 ntBASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 RPS15P9-201ENST00000494093 319 ntBASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 AC005829.1-201ENST00000570002 483 ntBASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 MIR4751-201ENST00000578027 74 ntBASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms