Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTPS2Q9NRF8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 AL391256.1-201ENST00000443260 1855 ntBASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 FGFR3P6-201ENST00000457012 610 ntBASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 AL139288.1-201ENST00000623748 933 ntBASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTPS2Q9NRF8 HLA-A-202ENST00000376806 1854 ntBASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 AC046158.3-201ENST00000624947 2558 ntBASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 AF238378.1-201ENST00000526806 358 ntBASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 AC006449.5-201ENST00000610658 2098 ntBASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.67■□□□□ 0.1
CTPS2Q9NRF8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTPS2Q9NRF8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms