Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN4Q9NQP4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PFDN4Q9NQP4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN4Q9NQP4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 LINC00265-3P-201ENST00000447588 903 ntBASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 MINOS1P3-201ENST00000457048 203 ntBASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AP002414.4-201ENST00000589764 1148 ntBASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AC005336.2-201ENST00000593183 939 ntBASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AC069148.1-201ENST00000608741 768 ntBASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 AC091076.1-201ENST00000610741 619 ntBASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN4Q9NQP4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 TOB2P1-201ENST00000469761 992 ntBASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 Z69720.1-201ENST00000601483 472 ntBASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 AC093458.2-201ENST00000623150 629 ntBASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 AC005052.1-201ENST00000625181 2492 ntBASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 AL662844.4-201ENST00000606367 2838 ntBASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN4Q9NQP4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 DOC2GP-204ENST00000639052 2548 ntBASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN4Q9NQP4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms