Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPS4Q9NQG7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 OR6D1P-203ENST00000641209 4860 ntBASIC17.35■□□□□ 0.37
HPS4Q9NQG7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 AC093214.1-201ENST00000511688 1107 ntBASIC17.35■□□□□ 0.37
HPS4Q9NQG7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS4Q9NQG7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 TUBB3P1-201ENST00000405796 1332 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 HCG4-201ENST00000418983 998 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 IGHV3-62-201ENST00000520057 340 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 AC106820.2-201ENST00000563775 3264 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 MIR4745-201ENST00000577608 62 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 AC084121.4-201ENST00000641598 221 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 AF228730.8-201ENST00000642140 221 ntBASIC17.34■□□□□ 0.37
HPS4Q9NQG7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS4Q9NQG7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
HPS4Q9NQG7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HPS4Q9NQG7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS4Q9NQG7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms