Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 MIR940-201ENST00000401276 94 ntBASIC14.37□□□□□ -0.11
GCM1Q9NP62 HCG4B-203ENST00000450128 991 ntBASIC14.37□□□□□ -0.11
GCM1Q9NP62 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.37□□□□□ -0.11
GCM1Q9NP62 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 AC140113.2-201ENST00000604370 208 ntBASIC14.37□□□□□ -0.11
GCM1Q9NP62 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 AC064836.3-201ENST00000607928 673 ntBASIC14.37□□□□□ -0.11
GCM1Q9NP62 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.37□□□□□ -0.11
GCM1Q9NP62 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GCM1Q9NP62 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AC009053.2-201ENST00000563701 2365 ntBASIC14.36□□□□□ -0.11
GCM1Q9NP62 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 KRT18P3-201ENST00000451602 1288 ntBASIC14.36□□□□□ -0.11
GCM1Q9NP62 RNA5SP416-201ENST00000516838 111 ntBASIC14.36□□□□□ -0.11
GCM1Q9NP62 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AL671883.3-201ENST00000603274 991 ntBASIC14.36□□□□□ -0.11
GCM1Q9NP62 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GCM1Q9NP62 AC092068.3-201ENST00000587894 2016 ntBASIC14.36□□□□□ -0.11
GCM1Q9NP62 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GCM1Q9NP62 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 AL021920.2-201ENST00000624828 1351 ntBASIC14.35□□□□□ -0.11
GCM1Q9NP62 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms