Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 AC092902.6-201ENST00000641783 218 ntBASIC18.45■□□□□ 0.54
TRIM6Q9C030 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 AL353732.1-201ENST00000569618 1459 ntBASIC18.45■□□□□ 0.54
TRIM6Q9C030 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM6Q9C030 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
TRIM6Q9C030 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 AL021920.2-201ENST00000624828 1351 ntBASIC18.44■□□□□ 0.54
TRIM6Q9C030 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM6Q9C030 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM6Q9C030 TOP3BP1-201ENST00000420768 1380 ntBASIC18.43■□□□□ 0.54
TRIM6Q9C030 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AC140658.5-201ENST00000438532 169 ntBASIC18.43■□□□□ 0.54
TRIM6Q9C030 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM6Q9C030 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM6Q9C030 LINC00896-202ENST00000609602 2128 ntBASIC18.43■□□□□ 0.54
TRIM6Q9C030 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM6Q9C030 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM6Q9C030 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM6Q9C030 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM6Q9C030 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM6Q9C030 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM6Q9C030 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM6Q9C030 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM6Q9C030 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms