Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH11XQ9BZA7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 AC114501.2-201ENST00000439631 535 ntBASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 AC044860.1-202ENST00000559481 777 ntBASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.52■■□□□ 1.03
PCDH11XQ9BZA7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 HILS1-202ENST00000545329 423 ntBASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AC061975.2-201ENST00000581722 295 ntBASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AC024267.1-201ENST00000582320 895 ntBASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 AL139011.1-202ENST00000642063 584 ntBASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 RNF165-205ENST00000588679 2904 ntBASIC21.51■■□□□ 1.03
PCDH11XQ9BZA7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 AL512384.1-201ENST00000406683 331 ntBASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 AC008494.3-201ENST00000606615 944 ntBASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH11XQ9BZA7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 AC092068.3-201ENST00000587894 2016 ntBASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 RN7SL752P-201ENST00000463779 287 ntBASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDH11XQ9BZA7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms