Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AL031055.1-201ENST00000606362 631 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AL603756.1-201ENST00000606511 2163 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC106886.4-201ENST00000623557 2502 ntBASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP4-3Q9BYR4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 TOP3BP1-201ENST00000420768 1380 ntBASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 FLJ38576-201ENST00000623820 2459 ntBASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 AC016396.2-201ENST00000562575 1417 ntBASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 AL023806.1-201ENST00000603994 1649 ntBASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 SPDYE14P-201ENST00000442619 822 ntBASIC5.68□□□□□ -1.5
KRTAP4-3Q9BYR4 BCRP1-201ENST00000444246 691 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms