Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 AL391256.1-201ENST00000443260 1855 ntBASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 MRPL3P1-201ENST00000400109 1033 ntBASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 PTCHD3P3-201ENST00000403073 906 ntBASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
YIPF4Q9BSR8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 ELK2BP-201ENST00000415014 1224 ntBASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 AL590627.1-203ENST00000421194 1026 ntBASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 AC023511.2-201ENST00000618803 211 ntBASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 TP73-AS1-207ENST00000624167 988 ntBASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 PI4KAP1-204ENST00000612579 1703 ntBASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
YIPF4Q9BSR8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
YIPF4Q9BSR8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.83■□□□□ 0.13
YIPF4Q9BSR8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.83■□□□□ 0.13
YIPF4Q9BSR8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
YIPF4Q9BSR8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
YIPF4Q9BSR8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
YIPF4Q9BSR8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
YIPF4Q9BSR8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
YIPF4Q9BSR8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
YIPF4Q9BSR8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
YIPF4Q9BSR8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms