Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCGF1Q9BSM1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 PI4KAP1-204ENST00000612579 1703 ntBASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PCGF1Q9BSM1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AC116353.5-201ENST00000638148 1699 ntBASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AC008667.4-201ENST00000607370 168 ntBASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AC064836.3-201ENST00000607928 673 ntBASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AC004790.2-201ENST00000623588 572 ntBASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 AL805961.1-202ENST00000641562 540 ntBASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.14□□□□□ -0.15
PCGF1Q9BSM1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms