Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CYP2A7P1-201ENST00000595391 815 ntBASIC16.35■□□□□ 0.21
PKP4Q99569 AC064836.3-201ENST00000607928 673 ntBASIC16.35■□□□□ 0.21
PKP4Q99569 AC010507.1-201ENST00000633895 436 ntBASIC16.35■□□□□ 0.21
PKP4Q99569 SNX33P1-201ENST00000592116 1762 ntBASIC16.35■□□□□ 0.21
PKP4Q99569 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PKP4Q99569 HLA-A-202ENST00000376806 1854 ntBASIC16.35■□□□□ 0.21
PKP4Q99569 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
PKP4Q99569 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PKP4Q99569 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.35■□□□□ 0.21
PKP4Q99569 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PKP4Q99569 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PKP4Q99569 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.34■□□□□ 0.21
PKP4Q99569 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 AL671710.1-201ENST00000610245 2349 ntBASIC16.34■□□□□ 0.21
PKP4Q99569 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PKP4Q99569 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.34■□□□□ 0.21
PKP4Q99569 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 HCG4-201ENST00000418983 998 ntBASIC16.34■□□□□ 0.21
PKP4Q99569 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.34■□□□□ 0.21
PKP4Q99569 KRT18P2-201ENST00000447938 1258 ntBASIC16.34■□□□□ 0.21
PKP4Q99569 AL513480.1-201ENST00000451731 511 ntBASIC16.34■□□□□ 0.21
PKP4Q99569 AC087641.1-201ENST00000557561 1021 ntBASIC16.34■□□□□ 0.21
PKP4Q99569 AC096734.2-201ENST00000562054 433 ntBASIC16.34■□□□□ 0.21
PKP4Q99569 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.34■□□□□ 0.21
PKP4Q99569 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.34■□□□□ 0.21
PKP4Q99569 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.34■□□□□ 0.21
PKP4Q99569 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.34■□□□□ 0.21
PKP4Q99569 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.34■□□□□ 0.21
PKP4Q99569 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PKP4Q99569 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.34■□□□□ 0.21
PKP4Q99569 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PKP4Q99569 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.33■□□□□ 0.21
PKP4Q99569 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PKP4Q99569 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
PKP4Q99569 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PKP4Q99569 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PKP4Q99569 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.33■□□□□ 0.2
PKP4Q99569 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.33■□□□□ 0.2
PKP4Q99569 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.33■□□□□ 0.2
PKP4Q99569 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.33■□□□□ 0.2
PKP4Q99569 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 AP001350.2-201ENST00000625104 1094 ntBASIC16.33■□□□□ 0.2
PKP4Q99569 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.33■□□□□ 0.2
PKP4Q99569 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 AC012569.1-201ENST00000591191 1524 ntBASIC16.33■□□□□ 0.2
PKP4Q99569 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PKP4Q99569 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.33■□□□□ 0.2
PKP4Q99569 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.33■□□□□ 0.2
PKP4Q99569 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PKP4Q99569 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PKP4Q99569 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms