Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAPGEF4Q8WZA2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAPGEF4Q8WZA2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAPGEF4Q8WZA2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RAPGEF4Q8WZA2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAPGEF4Q8WZA2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 BANF1P1-201ENST00000553684 263 ntBASIC21.83■■□□□ 1.09
RAPGEF4Q8WZA2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
RAPGEF4Q8WZA2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 AC092053.1-201ENST00000605787 1936 ntBASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 HLA-J-202ENST00000469281 1241 ntBASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 MEIS3P1-201ENST00000495167 958 ntBASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAPGEF4Q8WZA2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 OR8S1-201ENST00000310194 1080 ntBASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF4Q8WZA2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF4Q8WZA2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms