Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 AC098831.1-202ENST00000438821 336 ntBASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 AC002310.6-201ENST00000624451 1377 ntBASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 AC005052.1-201ENST00000625181 2492 ntBASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 AC079776.4-201ENST00000511039 504 ntBASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SIMC1Q8NDZ2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.85■□□□□ 0.13
SIMC1Q8NDZ2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms