Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 MIR663B-201ENST00000408361 115 ntBASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 CSF2RBP1-201ENST00000447905 391 ntBASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC108725.1-201ENST00000495472 409 ntBASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AL512361.1-201ENST00000554200 418 ntBASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 KRT8P12-202ENST00000472924 1397 ntBASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC073439.1-201ENST00000624121 1774 ntBASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC168Q8NDH2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCDC168Q8NDH2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CCDC168Q8NDH2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 MIR3615-201ENST00000581999 87 ntBASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 NUS1P3-201ENST00000423502 862 ntBASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 SDHAP3-202ENST00000515467 728 ntBASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC168Q8NDH2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms