Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.16■□□□□ 0.34
SIX5Q8N196 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.16■□□□□ 0.34
SIX5Q8N196 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.16■□□□□ 0.34
SIX5Q8N196 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.16■□□□□ 0.34
SIX5Q8N196 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.16■□□□□ 0.34
SIX5Q8N196 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.16■□□□□ 0.34
SIX5Q8N196 HLA-V-204ENST00000476601 1289 ntBASIC17.16■□□□□ 0.34
SIX5Q8N196 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.16■□□□□ 0.34
SIX5Q8N196 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.16■□□□□ 0.34
SIX5Q8N196 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.16■□□□□ 0.34
SIX5Q8N196 AC012183.1-201ENST00000625197 499 ntBASIC17.16■□□□□ 0.34
SIX5Q8N196 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.16■□□□□ 0.34
SIX5Q8N196 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
SIX5Q8N196 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.16■□□□□ 0.34
SIX5Q8N196 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 AL391005.1-201ENST00000623953 2435 ntBASIC17.16■□□□□ 0.34
SIX5Q8N196 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SIX5Q8N196 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIX5Q8N196 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SIX5Q8N196 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 AP3S2-216ENST00000617003 1561 ntBASIC17.15■□□□□ 0.34
SIX5Q8N196 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.15■□□□□ 0.34
SIX5Q8N196 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SIX5Q8N196 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SIX5Q8N196 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 AC098614.1-201ENST00000368528 745 ntBASIC17.15■□□□□ 0.34
SIX5Q8N196 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SIX5Q8N196 AL353779.1-201ENST00000434793 351 ntBASIC17.15■□□□□ 0.34
SIX5Q8N196 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.15■□□□□ 0.34
SIX5Q8N196 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SIX5Q8N196 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.15■□□□□ 0.34
SIX5Q8N196 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.15■□□□□ 0.34
SIX5Q8N196 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.15■□□□□ 0.34
SIX5Q8N196 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 WIZP1-201ENST00000531444 2299 ntBASIC17.15■□□□□ 0.34
SIX5Q8N196 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SIX5Q8N196 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIX5Q8N196 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIX5Q8N196 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SIX5Q8N196 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SIX5Q8N196 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX5Q8N196 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.14■□□□□ 0.33
SIX5Q8N196 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX5Q8N196 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.14■□□□□ 0.33
SIX5Q8N196 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SIX5Q8N196 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.14■□□□□ 0.33
SIX5Q8N196 AC009477.1-201ENST00000452936 217 ntBASIC17.14■□□□□ 0.33
SIX5Q8N196 INE1-201ENST00000456273 945 ntBASIC17.14■□□□□ 0.33
SIX5Q8N196 API5-211ENST00000534695 560 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX5Q8N196 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SIX5Q8N196 AC008738.7-201ENST00000609744 511 ntBASIC17.14■□□□□ 0.33
SIX5Q8N196 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.14■□□□□ 0.33
SIX5Q8N196 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX5Q8N196 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIX5Q8N196 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX5Q8N196 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.14■□□□□ 0.33
SIX5Q8N196 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms