Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
XRN1Q8IZH2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
XRN1Q8IZH2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
XRN1Q8IZH2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
XRN1Q8IZH2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
XRN1Q8IZH2 AC135050.7-201ENST00000624508 2218 ntBASIC22.85■■□□□ 1.25
XRN1Q8IZH2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 MIR1908-201ENST00000410394 80 ntBASIC22.85■■□□□ 1.25
XRN1Q8IZH2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 CDC14C-201ENST00000428251 1719 ntBASIC22.85■■□□□ 1.25
XRN1Q8IZH2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 AC233724.13-201ENST00000598383 410 ntBASIC22.85■■□□□ 1.25
XRN1Q8IZH2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
XRN1Q8IZH2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 AC099548.2-209ENST00000480264 625 ntBASIC22.84■■□□□ 1.25
XRN1Q8IZH2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 RARRES2P5-201ENST00000564013 466 ntBASIC22.84■■□□□ 1.25
XRN1Q8IZH2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC22.84■■□□□ 1.25
XRN1Q8IZH2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 AC099336.1-201ENST00000417053 1171 ntBASIC22.83■■□□□ 1.25
XRN1Q8IZH2 FAM8A2P-201ENST00000528813 1142 ntBASIC22.83■■□□□ 1.25
XRN1Q8IZH2 MIR6787-201ENST00000616675 61 ntBASIC22.83■■□□□ 1.25
XRN1Q8IZH2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
XRN1Q8IZH2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC22.83■■□□□ 1.24
XRN1Q8IZH2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC22.82■■□□□ 1.24
XRN1Q8IZH2 AC084346.2-201ENST00000607097 949 ntBASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms