Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 AC106881.1-201ENST00000605849 3329 ntBASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.28■□□□□ 0.04
CROCCP3Q8IVE0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 AL109923.1-201ENST00000618799 583 ntBASIC15.27■□□□□ 0.04
CROCCP3Q8IVE0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.27■□□□□ 0.03
CROCCP3Q8IVE0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TSPY17P-201ENST00000450329 467 ntBASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.26■□□□□ 0.03
CROCCP3Q8IVE0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms