Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 AC099568.2-201ENST00000609194 695 ntBASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 AL033527.5-202ENST00000641632 1098 ntBASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CCDC141Q6ZP82 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 AL512384.1-201ENST00000406683 331 ntBASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 FTH1-202ENST00000526640 786 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 TEX48-202ENST00000612244 662 ntTSL 3 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC141Q6ZP82 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 SRD5A3P1-201ENST00000603021 949 ntBASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 AC026979.3-201ENST00000607315 403 ntBASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC141Q6ZP82 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 AC087499.6-201ENST00000411576 835 ntBASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 HLA-V-201ENST00000429037 534 ntBASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 AL645728.1-201ENST00000366221 2101 ntBASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 AL023806.1-201ENST00000603994 1649 ntBASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 STX6-204ENST00000542060 4809 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC141Q6ZP82 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC24.64■■□□□ 1.54
CCDC141Q6ZP82 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCDC141Q6ZP82 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms