Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.39■□□□□ 0.7
PDZRN4Q6ZMN7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.39■□□□□ 0.7
PDZRN4Q6ZMN7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDZRN4Q6ZMN7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDZRN4Q6ZMN7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDZRN4Q6ZMN7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDZRN4Q6ZMN7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 NUS1P2-201ENST00000417358 873 ntBASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 POM121L3P-201ENST00000419331 1163 ntBASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 AC079781.3-201ENST00000449110 356 ntBASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 AL160237.2-201ENST00000556165 472 ntBASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDZRN4Q6ZMN7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 FAM45BP-202ENST00000592932 1624 ntBASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 AC099343.3-201ENST00000605834 2503 ntBASIC19.38■□□□□ 0.69
PDZRN4Q6ZMN7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 BNIP3P18-201ENST00000593976 575 ntBASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDZRN4Q6ZMN7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms