Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 AC026150.2-201ENST00000564693 1156 ntBASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 AL138918.1-201ENST00000568306 659 ntBASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 AL136317.3-201ENST00000618497 906 ntBASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DCLRE1AQ6PJP8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 AC138761.1-201ENST00000584393 385 ntBASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DCLRE1AQ6PJP8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 MIR4745-201ENST00000577608 62 ntBASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DCLRE1AQ6PJP8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.84■□□□□ 0.45
DCLRE1AQ6PJP8 PCDHB17P-201ENST00000539533 2393 ntBASIC17.84■□□□□ 0.45
DCLRE1AQ6PJP8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
DCLRE1AQ6PJP8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DCLRE1AQ6PJP8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
DCLRE1AQ6PJP8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms