Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 AC239800.4-201ENST00000603712 296 ntBASIC17.64■□□□□ 0.41
RNF43Q68DV7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF43Q68DV7 AC060834.1-201ENST00000443027 2032 ntBASIC17.64■□□□□ 0.41
RNF43Q68DV7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF43Q68DV7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 CRYGEP-201ENST00000412192 528 ntBASIC17.63■□□□□ 0.41
RNF43Q68DV7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 RHOQP3-201ENST00000437982 621 ntBASIC17.63■□□□□ 0.41
RNF43Q68DV7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF43Q68DV7 AL596257.1-201ENST00000641463 2694 ntBASIC17.63■□□□□ 0.41
RNF43Q68DV7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF43Q68DV7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 AC026691.1-201ENST00000602502 2017 ntBASIC17.62■□□□□ 0.41
RNF43Q68DV7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 MIR4751-201ENST00000578027 74 ntBASIC17.62■□□□□ 0.41
RNF43Q68DV7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF43Q68DV7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF43Q68DV7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF43Q68DV7 MIR770-201ENST00000390219 98 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 CNN2P11-201ENST00000429351 262 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 YBX1P5-201ENST00000509441 847 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 AC096734.2-201ENST00000562054 433 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 AP002472.1-201ENST00000577490 586 ntBASIC17.61■□□□□ 0.41
RNF43Q68DV7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF43Q68DV7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms