Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AL162726.2-201ENST00000438986 1017 ntBASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AC024267.1-201ENST00000582320 895 ntBASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNAPC4Q5SXM2 AC116353.5-201ENST00000638148 1699 ntBASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC26.92■■□□□ 1.9
SNAPC4Q5SXM2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 AC009542.2-202ENST00000619004 1067 ntBASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 AL158212.4-201ENST00000624062 1286 ntBASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 AC012317.2-201ENST00000623305 2251 ntBASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC26.91■■□□□ 1.9
SNAPC4Q5SXM2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 RPL7P3-201ENST00000441388 714 ntBASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC26.9■■□□□ 1.9
SNAPC4Q5SXM2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 AC013467.2-201ENST00000605472 835 ntBASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC26.89■■□□□ 1.9
SNAPC4Q5SXM2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC26.89■■□□□ 1.89
SNAPC4Q5SXM2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SNAPC4Q5SXM2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms