Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 FAM86MP-201ENST00000340703 885 ntBASIC20.6■□□□□ 0.89
DDR1Q08345 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
DDR1Q08345 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
DDR1Q08345 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.6■□□□□ 0.89
DDR1Q08345 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.6■□□□□ 0.89
DDR1Q08345 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.6■□□□□ 0.89
DDR1Q08345 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.6■□□□□ 0.89
DDR1Q08345 MIR4525-201ENST00000580000 75 ntBASIC20.6■□□□□ 0.89
DDR1Q08345 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.6■□□□□ 0.89
DDR1Q08345 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.6■□□□□ 0.89
DDR1Q08345 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.6■□□□□ 0.89
DDR1Q08345 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.6■□□□□ 0.89
DDR1Q08345 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.6■□□□□ 0.89
DDR1Q08345 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.6■□□□□ 0.89
DDR1Q08345 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.6■□□□□ 0.89
DDR1Q08345 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.6■□□□□ 0.89
DDR1Q08345 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDR1Q08345 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DDR1Q08345 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DDR1Q08345 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.59■□□□□ 0.89
DDR1Q08345 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DDR1Q08345 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.59■□□□□ 0.89
DDR1Q08345 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 SPDYE17-201ENST00000412399 783 ntBASIC20.59■□□□□ 0.89
DDR1Q08345 CROCCP4-201ENST00000457096 498 ntBASIC20.59■□□□□ 0.89
DDR1Q08345 SERBP1P3-201ENST00000459980 809 ntBASIC20.59■□□□□ 0.89
DDR1Q08345 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.59■□□□□ 0.89
DDR1Q08345 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.59■□□□□ 0.89
DDR1Q08345 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.59■□□□□ 0.89
DDR1Q08345 WFDC1-204ENST00000613603 549 ntBASIC20.59■□□□□ 0.89
DDR1Q08345 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.59■□□□□ 0.89
DDR1Q08345 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.59■□□□□ 0.89
DDR1Q08345 AL109936.8-201ENST00000641772 604 ntBASIC20.59■□□□□ 0.89
DDR1Q08345 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
DDR1Q08345 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDR1Q08345 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDR1Q08345 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDR1Q08345 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDR1Q08345 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DDR1Q08345 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDR1Q08345 AC006277.1-201ENST00000624348 1610 ntBASIC20.58■□□□□ 0.89
DDR1Q08345 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.58■□□□□ 0.89
DDR1Q08345 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDR1Q08345 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.58■□□□□ 0.89
DDR1Q08345 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.58■□□□□ 0.89
DDR1Q08345 KRT223P-202ENST00000449164 1292 ntBASIC20.58■□□□□ 0.89
DDR1Q08345 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.58■□□□□ 0.89
DDR1Q08345 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DDR1Q08345 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
DDR1Q08345 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDR1Q08345 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDR1Q08345 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDR1Q08345 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.58■□□□□ 0.88
DDR1Q08345 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDR1Q08345 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDR1Q08345 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
DDR1Q08345 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDR1Q08345 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DDR1Q08345 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 BNIP3P42-201ENST00000454982 569 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 SDHAP3-202ENST00000515467 728 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
DDR1Q08345 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.57■□□□□ 0.88
DDR1Q08345 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDR1Q08345 AC008735.3-201ENST00000596646 500 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 BNIP3P29-201ENST00000598302 571 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.57■□□□□ 0.88
DDR1Q08345 AC013467.2-201ENST00000605472 835 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 AC084346.2-201ENST00000607097 949 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.57■□□□□ 0.88
DDR1Q08345 AC011447.5-201ENST00000616168 564 ntBASIC20.57■□□□□ 0.88
DDR1Q08345 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.57■□□□□ 0.88
DDR1Q08345 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms