Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.58■□□□□ 0.4
CBX1P83916 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CBX1P83916 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 AC112504.1-201ENST00000623415 1841 ntBASIC17.58■□□□□ 0.4
CBX1P83916 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX1P83916 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX1P83916 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX1P83916 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CBX1P83916 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX1P83916 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.57■□□□□ 0.4
CBX1P83916 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.57■□□□□ 0.4
CBX1P83916 AC005104.2-201ENST00000427818 678 ntBASIC17.57■□□□□ 0.4
CBX1P83916 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX1P83916 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX1P83916 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX1P83916 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX1P83916 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX1P83916 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX1P83916 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 CICP17-201ENST00000418553 2377 ntBASIC17.56■□□□□ 0.4
CBX1P83916 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.56■□□□□ 0.4
CBX1P83916 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 ZNRF2P3-201ENST00000424200 374 ntBASIC17.56■□□□□ 0.4
CBX1P83916 C1QL1P1-201ENST00000568105 661 ntBASIC17.56■□□□□ 0.4
CBX1P83916 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX1P83916 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.56■□□□□ 0.4
CBX1P83916 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX1P83916 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX1P83916 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CBX1P83916 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX1P83916 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX1P83916 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms